From 3cb1eed8f06b1ba31a1ad3a8275376ef1d4504ac Mon Sep 17 00:00:00 2001
From: Katzlab <katzlab@smith.edu>
Date: Thu, 4 Jan 2024 14:00:25 -0500
Subject: [PATCH] Updated Home (markdown)

---
 Home.md | 30 +++++++++++++++---------------
 1 file changed, 15 insertions(+), 15 deletions(-)

diff --git a/Home.md b/Home.md
index c848b03..5134eda 100644
--- a/Home.md
+++ b/Home.md
@@ -7,25 +7,25 @@ PhyloToL is…
 ## Introduction
 
 ## PhyloToL Part I = determining gene families
-### Overview
-###Set up
-###The hook - for determining gene families
-###Processing transcriptomes
-###Processing genomes with CDs
-###Starting at different points in the process (Folder structure)
-###Appendices
+Overview
+Set up
+The hook - for determining gene families
+Processing transcriptomes
+Processing genomes with CDs
+Starting at different points in the process (Folder structure)
+Appendices
 
 ##PhyloToL Part 2 = generating MSAs and gene trees
-###Overview of the process
-### Producing MSA - curated or not (PreG - Guidance)
-### Filtering on GC3 content
-### Making Trees 
-### Contamination loop - additional curation 
+Overview of the process
+Producing MSA - curated or not (PreG - Guidance)
+Filtering on GC3 content
+Making Trees 
+Contamination loop - additional curation 
 
 ## Databases
-### PTL6-Hook
-### 1000 taxa ready to go’s
-### 1000 taxa curated for 500 GFs
+PTL6-Hook
+1000 taxa ready to go’s
+1000 taxa curated for 500 GFs
 
 ## Utilities