From 416fddfe1ef24942c2aa3b21f37d091aa9ee6ec7 Mon Sep 17 00:00:00 2001 From: Godwin Ani Date: Mon, 27 Jan 2025 15:06:15 -0500 Subject: [PATCH] Updated QuickStart EukPhylo (markdown) --- QuickStart-EukPhylo.md | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/QuickStart-EukPhylo.md b/QuickStart-EukPhylo.md index 9fd2597..a49502f 100644 --- a/QuickStart-EukPhylo.md +++ b/QuickStart-EukPhylo.md @@ -81,8 +81,9 @@ To add the XPC option, only available for transcriptomes, user need to add the - * A folder called “Scripts” filled with the 10 scripts from [here](https://github.com/Katzlab/PhyloToL-6/tree/main/PTL1/Genomes/Scripts) on Github. To run locally, pull out all scripts into main folder ### Running: +``` python wrapper.py -1 1 -2 5 --cds CDS -o Output_Folder --genetic_code Gcodes.txt -d Databases > log.txt - +``` Here add detail of each options possible: * -1 = start script * -2 = end script