From 417e67a9675a866fb5e54897bb1057844864b4dc Mon Sep 17 00:00:00 2001 From: Katzlab Date: Wed, 14 Aug 2024 04:34:09 -0400 Subject: [PATCH] Updated PhyloToL Part 1: GF assignment (markdown) --- PhyloToL-Part-1:-GF-assignment.md | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/PhyloToL-Part-1:-GF-assignment.md b/PhyloToL-Part-1:-GF-assignment.md index 73045ee..828666d 100644 --- a/PhyloToL-Part-1:-GF-assignment.md +++ b/PhyloToL-Part-1:-GF-assignment.md @@ -48,11 +48,11 @@ with the first ten digits representing a unique sample identifier. Each sequence >\>lcl|NC_000001.11_cds_NP_001005484.2_1 [gene=OR4F5] [db_xref=CCDS:CCDS30547.1,Ensembl:ENSP00000493376.2,GeneID:79501] [protein=olfactory receptor 4F5] [protein_id=NP_001005484.2] [location=join(65565..65573,69037..70008)] [gbkey=CDS] -ATGAAGAAGGTAACTGCAGAGGCTATTTCCTGGAATGAATCAACGAGTGAAACGAATAA -CTCTATGGTGACTGAATTCATTTTTCTGGGTCTCTCTGATTCTCAGGAACTCCAGACCT -TCCTATTTATGTTGTTTTTTGTATTCTATGGAGGAATCGTGTTTGGAAACCTTCTTATT -GTCATAACAGTGGTATCTGACTCCCACCTTCACTCTCCCATGTACTTCCTGCTAGCCAA -CCTCTGA... +> ATGAAGAAGGTAACTGCAGAGGCTATTTCCTGGAATGAATCAACGAGTGAAACGAATAA +> CTCTATGGTGACTGAATTCATTTTTCTGGGTCTCTCTGATTCTCAGGAACTCCAGACCT +> TCCTATTTATGTTGTTTTTTGTATTCTATGGAGGAATCGTGTTTGGAAACCTTCTTATT +> GTCATAACAGTGGTATCTGACTCCCACCTTCACTCTCCCATGTACTTCCTGCTAGCCAA +> CCTCTGA... And all of the CDS fasta files should be in a folder alongside the [Scripts](https://github.com/Katzlab/PhyloToL-6/blob/main/PTL1/Genomes/Scripts) and [Databases](https://github.com/Katzlab/PhyloToL-6/blob/main/PTL1/Genomes/Databases) folders, as above.