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Updated TroubleShooting & FAQs (markdown)

Godwin Ani 2024-08-12 09:58:27 -04:00
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TroubleShooting-&-FAQs.md

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# [Troubleshooting](https://github.com/Katzlab/PhyloToL-6/wiki/TroubleShooting-&-FAQs#Troubleshooting) # [Troubleshooting](https://github.com/Katzlab/PhyloToL-6/wiki/TroubleShooting-&-FAQs#Troubleshooting)
# [FAQs](https://github.com/Katzlab/PhyloToL-6/wiki/TroubleShooting-&-FAQs#FAQs) # [FAQs](https://github.com/Katzlab/PhyloToL-6/wiki/TroubleShooting-&-FAQs#FAQs)
* How do I set up my names and fasta files? * How do I set up my names and fasta files?
> Required elements are: > Required elements are:
* unique 10 digit code for each taxon (e.g. Op_me_Hsap for humans, Ba_pg_Ecol for _E. coli_) > * unique 10 digit code for each taxon (e.g. Op_me_Hsap for humans, Ba_pg_Ecol for _E. coli_)
* some unique identifier > * some unique identifier
* for Part 2, each sequence name should end with a 10 digit code for each gene family (e.g. OG6_123456) > * for Part 2, each sequence name should end with a 10 digit code for each gene family (e.g. OG6_123456)
* example: >Op_me_Hsap_HP067328_OG6_124578 > * example: >Op_me_Hsap_HP067328_OG6_124578