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Updated QuickStart EukPhylo (markdown)

Godwin Ani 2025-01-28 13:53:52 -05:00
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QuickStart-EukPhylo.md

@ -33,7 +33,7 @@ Dependencies & third party tools, along with the versions that we use at the Kat
# EukPhylo part 1 = Assigning Gene families # EukPhylo part 1 = Assigning Gene families
EukPhylo part 1 runs CDS (genome) or assembled transcripts (transcriptome) through several scripts in order (5 for CDS, 7 for assembled transcripts) to produce ReadyToGo files. These scripts are run through a ‘wrapper’ script. EukPhylo part 1 runs CDS (genome) or assembled transcripts (transcriptome) through several scripts in order (5 for CDS, 7 for assembled transcripts) to remove bacterial contamination and produce ReadyToGo files. These scripts are run through a ‘wrapper’ script.
## Transcriptomes: ## Transcriptomes:
### Set Up: ### Set Up: