YuuMJ1997/EukPhylo
1
0
Fork 0
mirror of http://43.156.76.180:8026/YuuMJ/EukPhylo.git synced 2025-12-27 05:30:25 +08:00
Code Issues Packages Projects Releases Wiki Activity

Updated Home (markdown)

Auden Cote-L'Heureux 2025-01-10 11:13:32 -05:00
parent 5ed72e10f0
commit 615f05adbb
1 changed files with 2 additions and 0 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

2
Home.md

@ -4,6 +4,8 @@ The core PhyloToL pipeline comprises two main components, which we refer to as P
We also provide a suite of utility scripts for describing data output by PhyloToL (e.g. basic sequence statistics such as composition, coverage, and length) as well as performing some of PhyloToL's more complex operations (e.g. "clade-grabbing") in a stand-alone form. We also provide a suite of utility scripts for describing data output by PhyloToL (e.g. basic sequence statistics such as composition, coverage, and length) as well as performing some of PhyloToL's more complex operations (e.g. "clade-grabbing") in a stand-alone form.
Example output files for PhyloToL part 2 and the contamination loop can be found [here](https://doi.org/10.6084/m9.figshare.26662018.v1).
## PhyloToL Part 1 – Gene family assignment ## PhyloToL Part 1 – Gene family assignment
* [Overview and modularity](https://github.com/Katzlab/PhyloToL-6/wiki/phylotol-part-1:-gf-assignment#overview-and-modularity) * [Overview and modularity](https://github.com/Katzlab/PhyloToL-6/wiki/phylotol-part-1:-gf-assignment#overview-and-modularity)
* [Setup](https://github.com/Katzlab/PhyloToL-6/wiki/phylotol-part-1:-gf-assignment#setup) * [Setup](https://github.com/Katzlab/PhyloToL-6/wiki/phylotol-part-1:-gf-assignment#setup)