From a3650f49f72140b223ef006c4abbb962d21a1c1e Mon Sep 17 00:00:00 2001 From: Godwin Ani Date: Tue, 13 Aug 2024 10:30:50 -0400 Subject: [PATCH] Updated PhyloToL Part 1: GF assignment (markdown) --- PhyloToL-Part-1:-GF-assignment.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/PhyloToL-Part-1:-GF-assignment.md b/PhyloToL-Part-1:-GF-assignment.md index 4f9b2a2..10ef24c 100644 --- a/PhyloToL-Part-1:-GF-assignment.md +++ b/PhyloToL-Part-1:-GF-assignment.md @@ -99,7 +99,7 @@ As you run PhyloToL part 1 on transcriptomes, you might want to remove sequences `python Scripts/wrapper.py --first_script 1 --last_script 7 --assembled_transcripts AssembledTranscripts --output . --genetic_code Gcode.txt --databases Databases --xplate_contam --conspecific_names Conspecific.txt > log.txt` Example of a Conspecific.txt file - | Taxa | plate | + | Taxa | identifying name | | ----- |------ | | EE_uc_Me04 | Metatranscriptome | | EE_uc_Me05 | Metatranscriptome |