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Updated Troubleshooting_FAQs (markdown)

Katzlab 2024-08-11 04:28:37 -04:00
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Troubleshooting_FAQs.md

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* [Troubleshooting Guide](https://github.com/Katzlab/PhyloToL-6/wiki/Troubleshooting_FAQs/Troubleshooting_Guide) * [Troubleshooting Guide](https://github.com/Katzlab/PhyloToL-6/wiki/Troubleshooting_FAQs/Troubleshooting_Guide)
* [FAQs](https://github.com/Katzlab/PhyloToL-6/wiki/Troubleshooting_FAQs#FAQs1) * [FAQs](https://github.com/Katzlab/PhyloToL-6/wiki/Troubleshooting_FAQs#FAQs1)
* [FAQs](https://github.com/Katzlab/PhyloToL-6/wiki/Troubleshooting_FAQs/FAQs2) * [FAQs](https://github.com/Katzlab/PhyloToL-6/wiki/Troubleshooting_FAQs/FAQs2)
* ## How do I set up my names and fasta files?
### Required elements are:
* unique 10 digit code for each taxon (e.g. Op_me_Hsap for humans, Ba_pg_Ecol for _E. coli_)
* some unique identifier
* for Part 2, each sequence name should end with a 10 digit code for each gene family (e.g. OG6_123456)
* example: >Op_me_Hsap_HP067328_OG6_124578