From a8884aa45324f881c89957b794d34075fbfc39df Mon Sep 17 00:00:00 2001 From: Godwin Ani Date: Mon, 12 Aug 2024 13:17:13 -0400 Subject: [PATCH] Updated PhyloToL Part 1: GF assignment (markdown) --- PhyloToL-Part-1:-GF-assignment.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/PhyloToL-Part-1:-GF-assignment.md b/PhyloToL-Part-1:-GF-assignment.md index 672820b..06f3987 100644 --- a/PhyloToL-Part-1:-GF-assignment.md +++ b/PhyloToL-Part-1:-GF-assignment.md @@ -103,6 +103,6 @@ To process transcriptomes, run: * --genetic_code = specified genetic code, name of .txt file with Genetic codes * -d = path to Databases folder * />log.txt = if added to the end of the command, it will output a log file with progress, warning, or error messages - +* *For running with cross plate contamination removal, add `-x -n Conspecific.txt` to the line of code. ### Processing genomes