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Updated QuickStart EukPhylo (markdown)

Godwin Ani 2025-01-27 15:24:48 -05:00
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QuickStart-EukPhylo.md

@ -60,8 +60,8 @@ Here add detail of each option possible:
* log.txt = if added to the end of the command, it will output a log file with progress, warning, or error messages * log.txt = if added to the end of the command, it will output a log file with progress, warning, or error messages
### Output: ### Output:
* ReadyToGo = AA, NTD > ReadyToGo = AA, NTD
* Sequences statistics and summary > Sequences statistics and summary
### Modularity of options and replacing the Hook database ### Modularity of options and replacing the Hook database
EukPhylo part 1 for transcriptomes is composed of 7 scripts. User can choose to start or stop at each step by changing the -1 and/or -2 options. EukPhylo part 1 for transcriptomes is composed of 7 scripts. User can choose to start or stop at each step by changing the -1 and/or -2 options.
@ -94,8 +94,8 @@ Here add detail of each options possible:
* log.txt = if added to the end of the command, it will output a log file with progress, warning, or error messages * log.txt = if added to the end of the command, it will output a log file with progress, warning, or error messages
### Output: ### Output:
* ReadyToGo = AA, NTD > ReadyToGo = AA, NTD
* Sequences statistics and summary > Sequences statistics and summary
### Modularity of options and replacing the Hook database ### Modularity of options and replacing the Hook database
EukPhylo part 1 for genomes is composed of 5 scripts. User can choose to start or stop at each step by changing the -1 and/or -2 options. EukPhylo part 1 for genomes is composed of 5 scripts. User can choose to start or stop at each step by changing the -1 and/or -2 options.