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Updated Troubleshooting (markdown)
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Troubleshooting-and-FAQs.md
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# How do I set up my names and fasta files
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## Required elements are:
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* unique 10 digit code for each taxon (e.g. Op_me_Hsap for humans, Ba_pg_Ecol for _E. coli_)
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* some unique identifier
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* for Part 2, each sequence name should end with a 10 digit code for each gene family (e.g. OG6_123456)
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* example: >Op_me_Hsap_HP067328_OG6_124578
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Under construction!
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