diff --git a/PhyloToL-Part-1:-GF-assignment.md b/PhyloToL-Part-1:-GF-assignment.md
index beadc76..96599ed 100644
--- a/PhyloToL-Part-1:-GF-assignment.md
+++ b/PhyloToL-Part-1:-GF-assignment.md
@@ -95,7 +95,14 @@ Role of each script
 
 To process transcriptomes, run:
 
-`python wrapper.py -1 1 -2 7 --assembled_transcripts AssembledTranscripts -o . --genetic_code Universal -d Databases > log.txt`
+`python Scripts/wrapper.py -1 1 -2 7 --assembled_transcripts AssembledTranscripts --output . --genetic_code Universal -d Databases > log.txt`
+* -1 = start script
+* -2 = end script
+* --assembled_transcripts = Folder with Assembled transcripts in fasta format 
+* --output = path to output folder
+* --genetic_code = specified genetic code, name of .txt file with Genetic codes
+* -d = path to Databases folder 
+* > log.txt = if added to the end of the command, it will output a log file with progress, warning, or error messages
 
 
 ### Processing genomes