From da19f03dd1d15c26b3cb2e5c413a4a7434be63d3 Mon Sep 17 00:00:00 2001 From: Katzlab Date: Thu, 13 Feb 2025 15:34:30 -0500 Subject: [PATCH] Updated EukPhylo Part 2: MSAs, trees, and contamination loop (markdown) --- EukPhylo-Part-2:-MSAs,-trees,-and-contamination-loop.md | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/EukPhylo-Part-2:-MSAs,-trees,-and-contamination-loop.md b/EukPhylo-Part-2:-MSAs,-trees,-and-contamination-loop.md index 7dc0a67..2d9ad88 100644 --- a/EukPhylo-Part-2:-MSAs,-trees,-and-contamination-loop.md +++ b/EukPhylo-Part-2:-MSAs,-trees,-and-contamination-loop.md @@ -11,8 +11,7 @@ Example output files for EukPhylo part 2 and the contamination loop can be found # Installation -## Dependencies -The following are required to run EukPhylo part 1, and only needs to be done once. The dependencies are confirmed to work using the version numbers in parentheses, though other versions may work as well. +The following dependencies are required to run EukPhylo part 2, and only needs to be done once. The dependencies are confirmed to work using the version numbers in parentheses, though other versions may work as well. * Python 3, and the following libraries: * [Biopython](https://biopython.org/docs/latest/index.html) (version 1.75) * [ETE3](http://etetoolkit.org/) (version 3.1.2.)