From e6ba86b3647dcd252c860ae9b7d7e0dfea5998c0 Mon Sep 17 00:00:00 2001 From: Katzlab Date: Wed, 14 Aug 2024 05:03:26 -0400 Subject: [PATCH] Updated TroubleShooting & FAQs (markdown) --- TroubleShooting-&-FAQs.md | 7 +++++++ 1 file changed, 7 insertions(+) diff --git a/TroubleShooting-&-FAQs.md b/TroubleShooting-&-FAQs.md index 8ecac8f..8b97f47 100644 --- a/TroubleShooting-&-FAQs.md +++ b/TroubleShooting-&-FAQs.md @@ -1,6 +1,13 @@ # [Troubleshooting](https://github.com/Katzlab/PhyloToL-6/wiki/TroubleShooting-&-FAQs#Troubleshooting) +## Common errors in setting up PhyloToL include: +* failure to name files or paths correctly (capitalization and spacing matter) +* failure to control names of sequences (search for 10 digit code throughout wiki) + # [FAQs](https://github.com/Katzlab/PhyloToL-6/wiki/TroubleShooting-&-FAQs#FAQs) +* Where can I find the figures and databases referred to here +> Most items are found in our [figshare folder](https://figshare.com/account/home#/projects/196552) + * How do I set up my names and fasta files? > Required elements are: > * unique 10 digit code for each taxon (e.g. Op_me_Hsap for humans, Ba_pg_Ecol for _E. coli_)