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Updated Troubleshooting and FAQs (markdown)

Katzlab 2024-08-10 16:13:55 -04:00
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Troubleshooting-and-FAQs.md

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# Common errors and troubleshooting guide (https://github.com/Katzlab/PhyloToL-6/wiki/Troubleshooting-and-FAQs/Troubleshooting)
# FAQs (https://github.com/Katzlab/PhyloToL-6/wiki/Troubleshooting-and-FAQs/FAQs)
# How do I set up my names and fasta files
## Required elements are:
* unique 10 digit code for each taxon (e.g. Op_me_Hsap for humans, Ba_pg_Ecol for _E. coli_)
* some unique identifier
* for Part 2, each sequence name should end with a 10 digit code for each gene family (e.g. OG6_123456)
* example: >Op_me_Hsap_HP067328_OG6_124578
# [Common errors and troubleshooting guide] (https://github.com/Katzlab/PhyloToL-6/wiki/Troubleshooting-and-FAQs/Troubleshooting)
# [FAQs] (https://github.com/Katzlab/PhyloToL-6/wiki/Troubleshooting-and-FAQs/FAQs)