diff --git a/4_prediction/step.sh b/4_prediction/step.sh index 4ef590a..aac50d2 100644 --- a/4_prediction/step.sh +++ b/4_prediction/step.sh @@ -24,11 +24,11 @@ getAnnoFasta.pl Sacc_cerevisiae.gff3 && mv Sacc_cerevisiae.aa Sacc_cerevisiae_au # 从预测结果中提取氨基酸序列 TransDecoder.LongOrfs \ --t ../3_decontamination/5_Sacc_cerevisiae_dec_all_cov1_cdhit.fasta \ --O LongOrfs/Sacc_cerevisiae_clean_cdhit_ciliate \ +-t ../3_decontamination/5_S_dharwarensis_dec_all_cdhit.fasta \ +-O S_dharwarensis_clean_cdhit_predict \ -G Ciliate TransDecoder.Predict \ --t ../3_decontamination/5_Sacc_cerevisiae_dec_all_cov1_cdhit.fasta \ --O Sacc_cerevisiae_clean_cdhit_predict \ +-t ../3_decontamination/5_S_dharwarensis_dec_all_cdhit.fasta \ +-O S_dharwarensis_clean_cdhit_predict \ -G Ciliate #转录组数据基因预测,-G参数改成help命令中相应物种的对应密码子,两条指令一起提交脚本运行 \ No newline at end of file