#PBS -N Saccharomyces_cerevisiae_spades_ymj
#PBS -l nodes=1:ppn=48
#PBS -r y
#PBS -q promax_yuu

cd /home/Data_01/yizhenzhen06/public_share/Saccharomyces_cerevisiae_DNA/2_assembly

echo Start Time is `date`

source activate spades

spades.py --sc -t 48 -m 200 \
-1 ../1_trim/SRR30661791_1_p.fastq \
-2 ../1_trim/SRR30661791_2_p.fastq \
-o spades

conda deactivate

echo End Time is `date`