17 lines
605 B
Plaintext
17 lines
605 B
Plaintext
#PBS -N Sacc_cerevisiae_augustus_ymj
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#PBS -l nodes=1:ppn=8
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#PBS -r y
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#PBS -q master_431
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cd /home/Data_01/yizhenzhen06/public_share/Saccharomyces_cerevisiae_DNA/4_prediction
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echo Start Time is `date`
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source activate augustus
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augustus --progress=true --protein=on --introns=on --start=on --stop=on --cds=on --codingseq=on --gff3=on --species=tetrahymena --extrinsicCfgFile=/home/Data_01/yizhenzhen06/miniconda3/envs/augustus/config/extrinsic/extrinsic.M.RM.E.W.cfg ../3_decontamination/5_Sacc_cerevisiae_dec_all_cov1_cdhit.fasta --outfile=Sacc_cerevisiae.gff3
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conda deactivate
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echo End Time is `date`
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