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Godwin Ani 2024-01-12 10:01:31 -05:00 committed by GitHub
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Utilities/For_Assemblies/plot_assemblies.R
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#Author, date: Elinor Sterner(esterner27@gmail.com), March 2023.
#Motivation: To describe transcriptomes.
#Intent: Plot length, coverage and GC of assembled transcripts with stats generated from assess_transcriptomes.py.
#Dependencies: Python3
#Inputs: assess_transcriptomes.py output (assembly_assessment.csv)
#Outputs: Several plots showing the distribution of length, GC content, and Coverage.
library(ggplot2)
library(tidyverse)
library(scales)