YuuMJ1997/EukPhylo
1
0
Fork 0
mirror of http://43.156.76.180:8026/YuuMJ/EukPhylo.git synced 2025-12-30 11:00:25 +08:00
Code Issues Packages Projects Releases Wiki Activity

Updated QuickStart EukPhylo (markdown)

Godwin Ani 2025-01-27 15:06:15 -05:00
parent 30820ee8b6
commit 416fddfe1e
1 changed files with 2 additions and 1 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

3
QuickStart-EukPhylo.md

@ -81,8 +81,9 @@ To add the XPC option, only available for transcriptomes, user need to add the -
* A folder called “Scripts” filled with the 10 scripts from [here](https://github.com/Katzlab/PhyloToL-6/tree/main/PTL1/Genomes/Scripts) on Github. To run locally, pull out all scripts into main folder * A folder called “Scripts” filled with the 10 scripts from [here](https://github.com/Katzlab/PhyloToL-6/tree/main/PTL1/Genomes/Scripts) on Github. To run locally, pull out all scripts into main folder
### Running: ### Running:
```
python wrapper.py -1 1 -2 5 --cds CDS -o Output_Folder --genetic_code Gcodes.txt -d Databases > log.txt python wrapper.py -1 1 -2 5 --cds CDS -o Output_Folder --genetic_code Gcodes.txt -d Databases > log.txt
```
Here add detail of each options possible: Here add detail of each options possible:
* -1 = start script * -1 = start script
* -2 = end script * -2 = end script