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Updated Set up (markdown)

rebeccagawron 2024-01-05 12:06:38 -05:00
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Set-up.md

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## Transcriptomes
### What you need in Transcriptomes folder:
* A folder called “AssembledTranscripts” with your assembled transcript fasta files
* A folder called “<span style="color:orange;">AssembledTranscripts</span>” with your assembled transcript fasta files
* A folder called “Databases” with the three folders:
* db_BvsE (how we ID likely-bacterial sequences)
* db_StopFreq (for stop codon assignment)