426 Commits

This Branch

This Branch

All Branches

Author	SHA1	Message	Date
Katzlab	59b74bfa5f	Update CladeGrabbing_v2.1.py	2024-01-29 08:20:30 -05:00
Auden Cote-L'Heureux	835104592f	Updating headers in CheckSetup.py	2024-01-26 11:47:22 -05:00
Auden Cote-L'Heureux	bf669310fd	Updating header and Hook name check CheckSetup.py	2024-01-26 11:46:06 -05:00
Auden Cote-L'Heureux	df54de3589	Updating header in wrapper.py	2024-01-26 11:42:05 -05:00
Auden Cote-L'Heureux	a3a49f39d2	Updating header in CUB.py	2024-01-26 11:41:05 -05:00
Auden Cote-L'Heureux	f3116ff874	Updating header in 5b_SummaryStats.py	2024-01-26 11:40:30 -05:00
Auden Cote-L'Heureux	427f9f7125	Updating header in 4_CountOGsDiamond.py	2024-01-26 11:38:42 -05:00
Auden Cote-L'Heureux	887d136f5b	Updating header in 5a_FinalizeName.py	2024-01-26 11:37:19 -05:00
Auden Cote-L'Heureux	612e427b4a	Updating header in 4_CountOGsDiamond.py	2024-01-26 11:36:32 -05:00
Auden Cote-L'Heureux	fa20addc6e	Updating header in 3_GCodeTranslate.py	2024-01-26 11:35:25 -05:00
Auden Cote-L'Heureux	7e5e739574	Updating header in 2_GCodeEval.py	2024-01-26 11:30:22 -05:00
Auden Cote-L'Heureux	511f0e7766	Updating header in 1_RenameCDS.py	2024-01-26 11:26:00 -05:00
Auden Cote-L'Heureux	b6954c127a	Annotating wrapper.py	2024-01-26 11:17:11 -05:00
Auden Cote-L'Heureux	48c3b08b53	Updating headers in CUB.py	2024-01-26 11:07:11 -05:00
Auden Cote-L'Heureux	6a2e815378	Updating header in 7b_SummaryStats.py	2024-01-26 11:05:28 -05:00
Auden Cote-L'Heureux	6008160934	Updating headers in 7a_FinalizeName.py	2024-01-26 11:01:01 -05:00
Auden Cote-L'Heureux	fcd86bfebf	Updating headers in 6_FilterPartials.py	2024-01-26 10:43:26 -05:00
Auden Cote-L'Heureux	0167e3da16	Updating headers in 6_FilterPartials.py	2024-01-26 10:43:04 -05:00
Auden Cote-L'Heureux	a33941b4ed	Updating headers in 5_GCodeTranslate.py	2024-01-26 10:39:33 -05:00
Godwin Ani	427f39325b	Delete Utilities/Basic statistics directory	2024-01-25 15:17:59 -05:00
Godwin Ani	82de92e12e	Create Readme.md	2024-01-25 15:15:50 -05:00
Auden Cote-L'Heureux	59bf186e91	Small update to concatenate.py	2024-01-24 11:58:57 -05:00
Katzlab	719ce9bb9d	Added optional line to have keys WITHIN names rather than exclusively at start of name	2024-01-20 16:44:02 -05:00
Katzlab	3ec22ac4ac	updating header	2024-01-20 16:19:28 -05:00
Katzlab	5c6573e0f9	Updating header	2024-01-20 16:18:22 -05:00
Auden Cote-L'Heureux	4b1197eaee	Headers in 4_InFrameStopCodonEstimator.py	2024-01-20 13:58:41 -05:00
Auden Cote-L'Heureux	4dd54cf87a	Headers in 4_InFrameStopCodonEstimator.py	2024-01-20 13:57:29 -05:00
Auden Cote-L'Heureux	9b02c0074c	Headers in 3_AssignOGs.py	2024-01-20 13:50:41 -05:00
Auden Cote-L'Heureux	559eee63f9	Headers in 3_AssignOGs.py	2024-01-20 13:49:52 -05:00
Godwin Ani	7268d8f593	Cluster_v2.0.py	2024-01-18 09:31:35 -05:00
Godwin Ani	e8afd97a16	Update Cluster_v2.0.py	2024-01-18 09:29:46 -05:00
Auden Cote-L'Heureux	ff9a419c4e	Updating annotations 2b_Identify_Proks.py	2024-01-16 14:32:50 -05:00
Auden Cote-L'Heureux	c77e63eb74	Updating header in 2b_Identify_Proks.py	2024-01-16 14:32:26 -05:00
Auden Cote-L'Heureux	e3077b1caa	Updating header in 2a_Identify_rRNA.py	2024-01-16 14:10:53 -05:00
Auden Cote-L'Heureux	e78d73ca25	Updating header in 1a_TranscriptLengthFilter.py	2024-01-16 14:05:44 -05:00
Auden Cote-L'Heureux	c15e663773	Updating header in 1b_CrossPlateContamination.py	2024-01-16 14:04:06 -05:00
Auden Cote-L'Heureux	c12aa46cf5	Updating header in 1a_TranscriptLengthFilter.py	2024-01-16 13:53:18 -05:00
Auden Cote-L'Heureux	d90e67c266	Updating header in 2a_Identify_rRNA.py	2024-01-16 12:11:57 -05:00
Auden Cote-L'Heureux	229bd77cca	Annotating 1b_CrossPlateContamination.py	2024-01-16 12:07:32 -05:00
Auden Cote-L'Heureux	e9286e7d7a	Updating header in 1b_CrossPlateContamination.py	2024-01-16 11:55:23 -05:00
Auden Cote-L'Heureux	1bc56f2a52	Updating header in 1a_TranscriptLengthFilter.py	2024-01-16 11:53:01 -05:00
Auden Cote-L'Heureux	3d5cd6cebc	Updating header in 1a_TranscriptLengthFilter.py	2024-01-16 11:46:20 -05:00
Godwin Ani	967999ca0d	Update and rename SeqLengthToCsv_v1.0.py to SeqLenToCsv_v1.0.py	2024-01-15 15:08:40 -05:00
Godwin Ani	2f6bd2afc5	Rename PlotComps.r to PlotComps_v2.0.r	2024-01-15 15:08:03 -05:00
Godwin Ani	14f1caddbc	Update and rename sharedOGs.py to SharedOGs_v1.0.py	2024-01-15 15:07:35 -05:00
Godwin Ani	4b4310a0c8	Update and rename get_taxonomy.py to GetTaxonomy_v1.0.py	2024-01-15 15:06:34 -05:00
Godwin Ani	035b8a61f0	Update and rename Query_SRA_egs.py to QuerySRA_v1.0.py	2024-01-15 15:05:23 -05:00
Godwin Ani	fa44e2176c	Update and rename get_unique_taxa.py to GetUniqueTaxa_v1.0.py	2024-01-15 15:03:39 -05:00
Godwin Ani	c1b32c97ae	Update ReadMapping_v2.0.py	2024-01-15 15:02:24 -05:00
Godwin Ani	a63b2e7dd7	Rename readmapping.py to ReadMapping_v2.0.py	2024-01-15 15:01:33 -05:00