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Updated EukPhylo QuickStart (markdown)

Adri K. Grow 2025-06-12 00:33:01 -04:00
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EukPhylo-QuickStart.md

@ -64,6 +64,7 @@ EukPhylo part 1 runs CDS (genomes) or assembled transcripts (transcriptomes) thr
* Hook *.dmnd file ([Current version Hook-1.0.dmnd]) * Hook *.dmnd file ([Current version Hook-1.0.dmnd])
* Hook *.fasta file ([Current version Hook-1.0.fasta]) * Hook *.fasta file ([Current version Hook-1.0.fasta])
* A folder called “Scripts” with scripts from [here](https://github.com/Katzlab/PhyloToL-6/tree/main/PTL1/Transcriptomes/Scripts) on GitHub * A folder called “Scripts” with scripts from [here](https://github.com/Katzlab/PhyloToL-6/tree/main/PTL1/Transcriptomes/Scripts) on GitHub
* An empty folder for the output named as indicated in the run command for flag -o
### Running: ### Running:
` `