155 Commits

Author SHA1 Message Date
Godwin N. Ani
591e32d5e5
Update wrapper.py 2025-09-23 16:01:59 -04:00
Adri K. Grow
f2d8fd9e6c
Update wrapper_submit.sh 2025-09-04 11:21:53 -04:00
Adri K. Grow
fbaa61f23e
Update wrapper_submit.sh 2025-09-04 11:21:17 -04:00
Godwin N. Ani
033ed1237e
Add files via upload 2025-08-27 10:49:37 -04:00
Adri K. Grow
4f400d61c8
Update wrapper_submit.sh 2025-08-25 17:21:34 -04:00
Adri K. Grow
f17b43ffc9
Update wrapper_submit.sh 2025-08-25 17:20:21 -04:00
Godwin N. Ani
5bee8e55d2
Update wrapper_submit.sh 2025-08-25 17:05:56 -04:00
Adri K. Grow
a00e51523f
Update wrapper_submit.sh 2025-08-25 11:49:11 -04:00
Adri K. Grow
cb71db1f72
Update wrapper_submit.sh 2025-08-25 11:47:10 -04:00
Adri K. Grow
e785532921
Update wrapper_submit.sh 2025-08-25 11:42:05 -04:00
Godwin N. Ani
c042f62249
Update wrapper_submit.sh 2025-08-25 10:59:29 -04:00
Godwin N. Ani
efebf01057
Update wrapper_submit.sh 2025-08-25 10:58:25 -04:00
Adri K. Grow
c079b58d87
Update wrapper_submit.sh 2025-06-27 13:33:22 -04:00
Adri K. Grow
d16560f747
Update wrapper_submit.sh 2025-06-27 13:29:37 -04:00
Adri K. Grow
d81926f179
Update wrapper_submit.sh 2025-06-12 00:44:27 -04:00
Adri K. Grow
6cb8a7b98a
Update wrapper_submit.sh 2025-06-11 23:46:58 -04:00
Katzlab
8ccde9800a
Update wrapper_submit.sh
fixed typo to add backslash at end here
2025-06-02 16:36:02 -04:00
Auden Cote-L'Heureux
8487f1d836
Updating headers in 6_FilterPartials.py 2025-03-19 09:20:37 -04:00
Adri K. Grow
6ff435291c
Update wrapper_submit.sh 2025-02-18 16:29:05 -05:00
Adri K. Grow
e3d215c7e9
Update wrapper_submit.sh 2025-02-13 18:22:03 -05:00
Auden Cote-L'Heureux
5284a71ce8
Updating headers and example commands in wrapper_submit.sh 2025-01-22 12:56:11 -05:00
Auden Cote-L'Heureux
4f033e8ab2
Updating header and example runs in wrapper_submit.sh 2025-01-22 12:51:10 -05:00
Auden Cote-L'Heureux
8d48e65b7f
updating header in wrapper.py 2025-01-19 11:05:28 -05:00
Auden Cote-L'Heureux
0ac714a63b
updating header in CheckSetup.py 2025-01-19 11:04:59 -05:00
Auden Cote-L'Heureux
7348c7445f
updating header in CUB.py 2025-01-19 11:04:41 -05:00
Auden Cote-L'Heureux
3ac37547b7
updating header in 7b_SummaryStats.py 2025-01-19 11:04:02 -05:00
Auden Cote-L'Heureux
de566bf546
updating header in 7a_FinalizeName.py 2025-01-19 11:03:31 -05:00
Auden Cote-L'Heureux
db22976d3c
Updating header in 6_FilterPartials.py 2025-01-19 11:02:43 -05:00
Auden Cote-L'Heureux
a9a151eeb3
updating header in 5_GCodeTranslate.py 2025-01-19 11:02:24 -05:00
Auden Cote-L'Heureux
41223ec75c
updating header in 4_InFrameStopCodonEstimator.py 2025-01-19 11:00:24 -05:00
Auden Cote-L'Heureux
97da58aaf0
updating header in 3_AssignOGs.py 2025-01-19 11:00:00 -05:00
Auden Cote-L'Heureux
ee7dce1af7
updating header in 2b_Identify_Proks.py 2025-01-19 10:59:34 -05:00
Auden Cote-L'Heureux
b61eb8be1b
Updating header in 2a_Identify_rRNA.py 2025-01-19 10:59:10 -05:00
Auden Cote-L'Heureux
ea96ad0fe4
Updating header in 1b_CrossPlateContamination.py 2025-01-19 10:58:09 -05:00
Auden Cote-L'Heureux
1d7749b3a6
Updating header in 1a_TranscriptLengthFilter.py 2025-01-19 10:57:44 -05:00
Auden Cote-L'Heureux
375bfef45e
Updating header wrapper.py 2025-01-19 10:55:37 -05:00
Auden Cote-L'Heureux
f5bb221378
Updating header in CheckSetup.py 2025-01-19 10:54:49 -05:00
Katzlab
31d0a8ddb2
Update CUB.py
headers
2025-01-19 10:54:01 -05:00
Katzlab
3491166695
Update 5b_SummaryStats.py
updated headers
2025-01-19 10:51:39 -05:00
Katzlab
cd226beb9c
Update 4_CountOGsDiamond.py 2025-01-19 10:49:41 -05:00
Adri K. Grow
dcf4079b86
Update wrapper_submit.sh
Updated modules for current grid use.
2024-11-11 21:19:16 -05:00
MCLeleu
f18717ac6b
Add files via upload 2024-10-15 11:46:37 -04:00
MCLeleu
da6ac878d3
Add files via upload 2024-10-15 11:46:12 -04:00
MCLeleu
eb81b5ebfa
Delete PTL1/Transcriptomes/TestData/Sr_rh_Amon_assembledTranscripts.fasta 2024-10-15 11:45:51 -04:00
MCLeleu
679f1a10c8
Delete PTL1/Transcriptomes/TestData/Sr_rh_Aa01_assembledTranscripts.fasta 2024-10-15 11:45:32 -04:00
MCLeleu
85be0f31ca
Delete PTL1/Transcriptomes/TestData/Sr_rh_Emac_assembledTranscripts.fasta 2024-10-15 11:45:21 -04:00
MCLeleu
4472f44e36
Add files via upload 2024-10-15 11:43:54 -04:00
Katzlab
9074a7a9bd
Delete PTL1/README.md 2024-08-09 10:06:05 -04:00
Auden Cote-L'Heureux
2b34d542a0
Fixing OG seqid-splitting error in 3_AssignOGs.py 2024-05-02 14:17:45 -04:00
Auden Cote-L'Heureux
4b934763da
Fixing OG seqid-splitting error in 3_AssignOGs.py 2024-05-02 14:11:31 -04:00