90 Commits

Author	SHA1	Message	Date
Godwin N. Ani	c042f62249	Update wrapper_submit.sh	2025-08-25 10:59:29 -04:00
Adri K. Grow	d81926f179	Update wrapper_submit.sh	2025-06-12 00:44:27 -04:00
Adri K. Grow	6cb8a7b98a	Update wrapper_submit.sh	2025-06-11 23:46:58 -04:00
Katzlab	8ccde9800a	Update wrapper_submit.sh ... fixed typo to add backslash at end here	2025-06-02 16:36:02 -04:00
Auden Cote-L'Heureux	8487f1d836	Updating headers in 6_FilterPartials.py	2025-03-19 09:20:37 -04:00
Adri K. Grow	e3d215c7e9	Update wrapper_submit.sh	2025-02-13 18:22:03 -05:00
Auden Cote-L'Heureux	5284a71ce8	Updating headers and example commands in wrapper_submit.sh	2025-01-22 12:56:11 -05:00
Auden Cote-L'Heureux	8d48e65b7f	updating header in wrapper.py	2025-01-19 11:05:28 -05:00
Auden Cote-L'Heureux	0ac714a63b	updating header in CheckSetup.py	2025-01-19 11:04:59 -05:00
Auden Cote-L'Heureux	7348c7445f	updating header in CUB.py	2025-01-19 11:04:41 -05:00
Auden Cote-L'Heureux	3ac37547b7	updating header in 7b_SummaryStats.py	2025-01-19 11:04:02 -05:00
Auden Cote-L'Heureux	de566bf546	updating header in 7a_FinalizeName.py	2025-01-19 11:03:31 -05:00
Auden Cote-L'Heureux	db22976d3c	Updating header in 6_FilterPartials.py	2025-01-19 11:02:43 -05:00
Auden Cote-L'Heureux	a9a151eeb3	updating header in 5_GCodeTranslate.py	2025-01-19 11:02:24 -05:00
Auden Cote-L'Heureux	41223ec75c	updating header in 4_InFrameStopCodonEstimator.py	2025-01-19 11:00:24 -05:00
Auden Cote-L'Heureux	97da58aaf0	updating header in 3_AssignOGs.py	2025-01-19 11:00:00 -05:00
Auden Cote-L'Heureux	ee7dce1af7	updating header in 2b_Identify_Proks.py	2025-01-19 10:59:34 -05:00
Auden Cote-L'Heureux	b61eb8be1b	Updating header in 2a_Identify_rRNA.py	2025-01-19 10:59:10 -05:00
Auden Cote-L'Heureux	ea96ad0fe4	Updating header in 1b_CrossPlateContamination.py	2025-01-19 10:58:09 -05:00
Auden Cote-L'Heureux	1d7749b3a6	Updating header in 1a_TranscriptLengthFilter.py	2025-01-19 10:57:44 -05:00
Adri K. Grow	dcf4079b86	Update wrapper_submit.sh ... Updated modules for current grid use.	2024-11-11 21:19:16 -05:00
Auden Cote-L'Heureux	2b34d542a0	Fixing OG seqid-splitting error in 3_AssignOGs.py	2024-05-02 14:17:45 -04:00
Auden Cote-L'Heureux	4b934763da	Fixing OG seqid-splitting error in 3_AssignOGs.py	2024-05-02 14:11:31 -04:00
Godwin Ani	b4d92dec13	Fixed blast hits	2024-04-26 14:25:37 -04:00
Godwin Ani	a70558b880	Fixed error with blast hits	2024-04-26 14:24:36 -04:00
Godwin Ani	bbe97c5888	Add files via upload	2024-04-26 14:23:55 -04:00
Auden Cote-L'Heureux	b8a68098f3	Fixing assembled transcript overwrite issue in 7b	2024-03-18 10:16:31 -04:00
Auden Cote-L'Heureux	1dcb7f05dd	Delete PTL1/Transcriptomes/Scripts/7b_SummaryStats.py	2024-03-18 10:15:58 -04:00
Auden Cote-L'Heureux	93b328306a	Halfway done with fix to wrapper.py	2024-02-16 14:10:14 -05:00
Auden Cote-L'Heureux	384dd72125	Adding check to 4_InFrameStopCodonEstimator.py	2024-02-16 14:06:06 -05:00
Auden Cote-L'Heureux	835104592f	Updating headers in CheckSetup.py	2024-01-26 11:47:22 -05:00
Auden Cote-L'Heureux	b6954c127a	Annotating wrapper.py	2024-01-26 11:17:11 -05:00
Auden Cote-L'Heureux	48c3b08b53	Updating headers in CUB.py	2024-01-26 11:07:11 -05:00
Auden Cote-L'Heureux	6a2e815378	Updating header in 7b_SummaryStats.py	2024-01-26 11:05:28 -05:00
Auden Cote-L'Heureux	6008160934	Updating headers in 7a_FinalizeName.py	2024-01-26 11:01:01 -05:00
Auden Cote-L'Heureux	fcd86bfebf	Updating headers in 6_FilterPartials.py	2024-01-26 10:43:26 -05:00
Auden Cote-L'Heureux	0167e3da16	Updating headers in 6_FilterPartials.py	2024-01-26 10:43:04 -05:00
Auden Cote-L'Heureux	a33941b4ed	Updating headers in 5_GCodeTranslate.py	2024-01-26 10:39:33 -05:00
Katzlab	3ec22ac4ac	updating header	2024-01-20 16:19:28 -05:00
Katzlab	5c6573e0f9	Updating header	2024-01-20 16:18:22 -05:00
Auden Cote-L'Heureux	4b1197eaee	Headers in 4_InFrameStopCodonEstimator.py	2024-01-20 13:58:41 -05:00
Auden Cote-L'Heureux	4dd54cf87a	Headers in 4_InFrameStopCodonEstimator.py	2024-01-20 13:57:29 -05:00
Auden Cote-L'Heureux	9b02c0074c	Headers in 3_AssignOGs.py	2024-01-20 13:50:41 -05:00
Auden Cote-L'Heureux	559eee63f9	Headers in 3_AssignOGs.py	2024-01-20 13:49:52 -05:00
Auden Cote-L'Heureux	ff9a419c4e	Updating annotations 2b_Identify_Proks.py	2024-01-16 14:32:50 -05:00
Auden Cote-L'Heureux	c77e63eb74	Updating header in 2b_Identify_Proks.py	2024-01-16 14:32:26 -05:00
Auden Cote-L'Heureux	e3077b1caa	Updating header in 2a_Identify_rRNA.py	2024-01-16 14:10:53 -05:00
Auden Cote-L'Heureux	e78d73ca25	Updating header in 1a_TranscriptLengthFilter.py	2024-01-16 14:05:44 -05:00
Auden Cote-L'Heureux	c15e663773	Updating header in 1b_CrossPlateContamination.py	2024-01-16 14:04:06 -05:00
Auden Cote-L'Heureux	c12aa46cf5	Updating header in 1a_TranscriptLengthFilter.py	2024-01-16 13:53:18 -05:00